Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | DU508_20160 | Not Available | Positive | 4650524 - 4651522 | 35941.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | DU508_20165 | Not Available | Positive | 4651642 - 4652118 | 16976.5 |
| acetyl-coa carboxylase biotin carboxylase subunit | DU508_20170 | Not Available | Positive | 4652227 - 4653570 | 49533.3 |
| hypothetical protein | DU508_20175 | Not Available | Positive | 4653740 - 4654954 | 44800.0 |
| twin-arginine translocase subunit tatc | DU508_20180 | Not Available | Positive | 4655139 - 4656020 | 33052.4 |
| ribose 5-phosphate isomerase b | DU508_20185 | Not Available | Positive | 4656066 - 4656503 | 15957.8 |
| peptidase | DU508_20190 | Not Available | Positive | 4656537 - 4658174 | 59949.5 |
| iron-sulfur cluster-binding protein | DU508_20195 | Not Available | Positive | 4658264 - 4659652 | 52264.9 |
| hypothetical protein | DU508_20200 | Not Available | Positive | 4659755 - 4659973 | 8523.13 |
| type ii toxin-antitoxin system vapc family toxin | DU508_20205 | Not Available | Positive | 4659955 - 4660344 | 14371.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

