Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | DU508_20060 | Not Available | Positive | 4631992 - 4632198 | 7903.45 |
| acetylornithine carbamoyltransferase | DU508_20065 | Not Available | Positive | 4632312 - 4633292 | 36589.0 |
| acetylglutamate kinase | DU508_20070 | Not Available | Positive | 4633398 - 4634186 | 28180.2 |
| pyrroline-5-carboxylate reductase | DU508_20075 | Not Available | Positive | 4634481 - 4635290 | 28133.3 |
| m20/m25/m40 family metallo-hydrolase | DU508_20080 | Not Available | Positive | 4635359 - 4636426 | 39201.6 |
| argininosuccinate lyase | DU508_20085 | Not Available | Positive | 4636610 - 4637941 | 49798.1 |
| hypothetical protein | DU508_20090 | Not Available | Positive | 4637961 - 4638149 | 6944.65 |
| hypothetical protein | DU508_20095 | Not Available | Positive | 4638149 - 4638481 | 12434.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DU508_20100 | Not Available | Positive | 4638513 - 4639766 | 45380.4 |
| hypothetical protein | DU508_20105 | Not Available | Positive | 4640089 - 4640295 | 7737.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

