Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | DU508_20005 | Not Available | Negative | 4619117 - 4620256 | 42298.9 |
| hypothetical protein | DU508_20010 | Not Available | Negative | 4620362 - 4621354 | 38580.6 |
| pepsy domain-containing protein | DU508_20015 | Not Available | Negative | 4621306 - 4622508 | 45435.3 |
| duf4198 domain-containing protein | DU508_20020 | Not Available | Negative | 4622584 - 4623297 | 26692.7 |
| tonb-dependent receptor | DU508_20025 | Not Available | Negative | 4623356 - 4625743 | 88105.1 |
| duf4397 domain-containing protein | DU508_20030 | Not Available | Negative | 4625978 - 4626685 | 25286.0 |
| gnat family n-acetyltransferase | DU508_20035 | Not Available | Positive | 4627247 - 4627948 | 26609.7 |
| argininosuccinate synthase | DU508_20040 | Not Available | Positive | 4627948 - 4629144 | 44251.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DU508_20045 | Not Available | Positive | 4629291 - 4630277 | 35794.9 |
| aspartate aminotransferase family protein | DU508_20055 | Not Available | Positive | 4630759 - 4631907 | 41704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

