Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase trpc | DU508_19950 | Not Available | Positive | 4602913 - 4603740 | 30445.5 |
| mechanosensitive ion channel family protein | DU508_19955 | Not Available | Positive | 4603857 - 4604936 | 41514.0 |
| rna-binding transcriptional accessory protein | DU508_19960 | Not Available | Negative | 4605434 - 4607719 | 84650.6 |
| sam-dependent methyltransferase | DU508_19965 | Not Available | Negative | 4607930 - 4608631 | 26387.8 |
| had family hydrolase | DU508_19975 | Not Available | Negative | 4611197 - 4611820 | 23775.6 |
| ytxh domain-containing protein | DU508_19980 | Not Available | Positive | 4611900 - 4612127 | 7593.16 |
| mbl fold metallo-hydrolase | DU508_19985 | Not Available | Positive | 4612185 - 4613585 | 52417.0 |
| class i sam-dependent methyltransferase | DU508_19990 | Not Available | Positive | 4613736 - 4614422 | 25866.8 |
| hypothetical protein | DU508_19995 | Not Available | Negative | 4614664 - 4617438 | 103716.0 |
| hypothetical protein | DU508_20000 | Not Available | Negative | 4617859 - 4618935 | 41411.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

