Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | DU508_19850 | Not Available | Negative | 4576343 - 4577632 | 49546.7 |
| ompa family protein | DU508_19855 | Not Available | Positive | 4577805 - 4579157 | 47875.9 |
| rida family protein | DU508_19860 | Not Available | Positive | 4579408 - 4579788 | 13647.3 |
| permease | DU508_19865 | Not Available | Positive | 4579791 - 4580693 | 34116.5 |
| atp-dependent dna helicase recg | DU508_19870 | Not Available | Positive | 4580699 - 4582804 | 79924.8 |
| mfs transporter | DU508_19875 | Not Available | Positive | 4582885 - 4584180 | 47661.4 |
| pldc_n domain-containing protein | DU508_19880 | Not Available | Negative | 4584342 - 4584557 | 8163.52 |
| abc transporter atp-binding protein | DU508_19885 | Not Available | Negative | 4584579 - 4586330 | 64943.3 |
| tonb-dependent receptor | DU508_19890 | Not Available | Negative | 4586436 - 4589585 | 115602.0 |
| hypothetical protein | DU508_19895 | Not Available | Negative | 4589796 - 4589996 | 7863.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

