Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_19750 | Not Available | Positive | 4549126 - 4550412 | 50903.0 |
| moxr family atpase | DU508_19755 | Not Available | Positive | 4550423 - 4551412 | 37343.6 |
| hypothetical protein | DU508_19760 | Not Available | Positive | 4551426 - 4555292 | 148048.0 |
| acyl-coa dehydrogenase | DU508_19765 | Not Available | Positive | 4555374 - 4556513 | 41836.2 |
| phage holin family protein | DU508_19770 | Not Available | Negative | 4556597 - 4556941 | 12049.6 |
| hypothetical protein | DU508_19775 | Not Available | Positive | 4556960 - 4557391 | 16044.3 |
| ribosome assembly cofactor rimp | DU508_19780 | Not Available | Positive | 4557513 - 4557977 | 17261.9 |
| transcription termination/antitermination protein nusa | DU508_19785 | Not Available | Positive | 4558043 - 4559287 | 47015.9 |
| translation initiation factor if-2 | DU508_19790 | Not Available | Positive | 4559350 - 4562400 | 109714.0 |
| atp-binding protein | DU508_19795 | Not Available | Positive | 4562576 - 4563808 | 47377.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

