Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific adenine glycosylase | DU508_19700 | Not Available | Positive | 4536781 - 4537839 | 40622.7 |
| single-stranded dna-binding protein | DU508_19705 | Not Available | Positive | 4537896 - 4538333 | 16301.3 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DU508_19710 | Not Available | Negative | 4538393 - 4540231 | 67808.1 |
| duf4270 family protein | DU508_19715 | Not Available | Negative | 4540365 - 4541768 | 50445.9 |
| starch synthase | DU508_19720 | Not Available | Negative | 4541790 - 4542620 | 31756.0 |
| pantoate--beta-alanine ligase | DU508_19725 | Not Available | Positive | 4542764 - 4543609 | 31553.4 |
| aspartate 1-decarboxylase | DU508_19730 | Not Available | Positive | 4543795 - 4544145 | 12813.6 |
| upf0104 family protein | DU508_19735 | Not Available | Positive | 4544147 - 4545121 | 36556.9 |
| tonb-dependent receptor | DU508_19740 | Not Available | Negative | 4545140 - 4547509 | 90459.3 |
| arac family transcriptional regulator | DU508_19745 | Not Available | Negative | 4547618 - 4548694 | 40587.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

