Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DU508_01880 | Not Available | Positive | 439480 - 440391 | 35430.0 |
| sdr family nad(p)-dependent oxidoreductase | DU508_01885 | Not Available | Positive | 440475 - 441323 | 30295.9 |
| thioredoxin family protein | DU508_01890 | Not Available | Negative | 441456 - 442061 | 21790.0 |
| tlpa family protein disulfide reductase | DU508_01895 | Not Available | Negative | 442069 - 442536 | 18042.2 |
| ld-carboxypeptidase | DU508_01900 | Not Available | Positive | 442810 - 443832 | 37992.9 |
| nicotinamide mononucleotide adenylyltransferase | DU508_01905 | Not Available | Negative | 443931 - 445247 | 49628.3 |
| hsp20/alpha crystallin family protein | DU508_01910 | Not Available | Negative | 445447 - 445881 | 16323.2 |
| acyl-coa thioesterase | DU508_01915 | Not Available | Positive | 445958 - 446446 | 19013.9 |
| fad-binding protein | DU508_01920 | Not Available | Negative | 446566 - 447981 | 51613.1 |
| dihydroneopterin aldolase | DU508_01925 | Not Available | Negative | 447985 - 448353 | 14081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

