Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | DU508_19645 | Not Available | Positive | 4523869 - 4525170 | 49321.4 |
| chloride channel protein | DU508_19650 | Not Available | Negative | 4525462 - 4526751 | 46347.0 |
| tryptophan 2,3-dioxygenase | DU508_19655 | Not Available | Positive | 4526896 - 4527861 | 37690.2 |
| branched-chain amino acid aminotransferase | DU508_19660 | Not Available | Positive | 4528006 - 4529070 | 39397.7 |
| duf4920 domain-containing protein | DU508_19665 | Not Available | Negative | 4529164 - 4529628 | 17131.2 |
| carboxypeptidase-like regulatory domain-containing protein | DU508_19675 | Not Available | Negative | 4530548 - 4531891 | 51961.7 |
| dna repair protein rada | DU508_19680 | Not Available | Negative | 4531932 - 4533308 | 50463.0 |
| ribonuclease e/g | DU508_19685 | Not Available | Negative | 4533589 - 4535139 | 58767.6 |
| hypothetical protein | DU508_19690 | Not Available | Negative | 4535421 - 4536299 | 31164.4 |
| integration host factor subunit beta | DU508_19695 | Not Available | Negative | 4536310 - 4536612 | 11063.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

