Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | DU508_19595 | Not Available | Negative | 4511764 - 4512483 | 27413.7 |
| 4'-phosphopantetheinyl transferase | DU508_19600 | Not Available | Negative | 4512502 - 4513149 | 24756.0 |
| dctp deaminase | DU508_19605 | Not Available | Positive | 4513221 - 4513757 | 20115.2 |
| tonb-dependent receptor | DU508_19610 | Not Available | Positive | 4514074 - 4516530 | 90393.9 |
| enoyl-coa hydratase/isomerase family protein | DU508_19615 | Not Available | Positive | 4516605 - 4517366 | 28093.1 |
| sdr family nad(p)-dependent oxidoreductase | DU508_19620 | Not Available | Positive | 4517420 - 4518295 | 31427.1 |
| phosphoribosylamine--glycine ligase | DU508_19625 | Not Available | Positive | 4518410 - 4519681 | 45562.7 |
| ahpc/tsa family protein | DU508_19630 | Not Available | Negative | 4520087 - 4521232 | 40988.0 |
| arginase | DU508_19635 | Not Available | Negative | 4521654 - 4522835 | 45035.0 |
| nad-dependent epimerase/dehydratase family protein | DU508_19640 | Not Available | Positive | 4522907 - 4523869 | 35495.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

