Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_19540 | Not Available | Positive | 4503790 - 4504479 | 25906.1 |
| is256 family transposase | DU508_19545 | Not Available | Negative | 4504593 - 4504768 | 6556.15 |
| protein kinase | DU508_19555 | Not Available | Positive | 4505145 - 4506455 | 48907.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DU508_19560 | Not Available | Negative | 4506452 - 4507507 | 39523.3 |
| 23s rrna pseudouridine(2604) synthase rluf | DU508_19565 | Not Available | Negative | 4507597 - 4508556 | 35998.1 |
| dinb family protein | DU508_19570 | Not Available | Negative | 4508701 - 4509261 | 21405.6 |
| rdd family protein | DU508_19575 | Not Available | Positive | 4509420 - 4510160 | 27659.0 |
| duf2752 domain-containing protein | DU508_19580 | Not Available | Negative | 4510162 - 4510557 | 15360.2 |
| cd225/dispanin family protein | DU508_19585 | Not Available | Negative | 4510558 - 4510902 | 12208.8 |
| sgnh/gdsl hydrolase family protein | DU508_19590 | Not Available | Negative | 4510991 - 4511713 | 26378.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

