Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_19490 | Not Available | Negative | 4493549 - 4494490 | 37065.5 |
| amidohydrolase | DU508_19495 | Not Available | Negative | 4494556 - 4495740 | 43352.8 |
| spor domain-containing protein | DU508_19500 | Not Available | Negative | 4495727 - 4496170 | 17230.9 |
| type ii toxin-antitoxin system rele/pare family toxin | DU508_19505 | Not Available | Negative | 4496414 - 4496707 | 11535.2 |
| hypothetical protein | DU508_19510 | Not Available | Negative | 4496692 - 4496919 | 8689.27 |
| preprotein translocase subunit seca | DU508_19515 | Not Available | Negative | 4497012 - 4500314 | 123957.0 |
| sensor histidine kinase | DU508_19520 | Not Available | Positive | 4500533 - 4501642 | 42541.3 |
| dna-binding response regulator | DU508_19525 | Not Available | Positive | 4501642 - 4502349 | 27143.2 |
| intradiol ring-cleavage dioxygenase | DU508_19530 | Not Available | Positive | 4502486 - 4503214 | 25391.7 |
| hypothetical protein | DU508_19535 | Not Available | Positive | 4503282 - 4503788 | 19614.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

