Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | DU508_19390 | Not Available | Negative | 4467599 - 4468894 | 47577.8 |
| deoxyhypusine synthase | DU508_19395 | Not Available | Negative | 4469149 - 4470129 | 37007.2 |
| polymerase | DU508_19400 | Not Available | Positive | 4470318 - 4471448 | 42594.9 |
| hypothetical protein | DU508_19405 | Not Available | Negative | 4471729 - 4473315 | 61035.1 |
| hypothetical protein | DU508_19410 | Not Available | Negative | 4473332 - 4474888 | 58625.7 |
| blai/meci/copy family transcriptional regulator | DU508_19415 | Not Available | Negative | 4474885 - 4475253 | 14463.4 |
| duf1345 domain-containing protein | DU508_19420 | Not Available | Negative | 4476022 - 4476681 | 24338.3 |
| class i sam-dependent methyltransferase | DU508_19425 | Not Available | Negative | 4476788 - 4477576 | 30216.4 |
| hypothetical protein | DU508_19430 | Not Available | Positive | 4477621 - 4478484 | 33331.5 |
| glycoside hydrolase | DU508_19435 | Not Available | Positive | 4478499 - 4479620 | 42044.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

