Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-copper oxidase subunit iii | DU508_19340 | Not Available | Negative | 4454811 - 4455377 | 21246.5 |
| protoheme ix farnesyltransferase | DU508_19345 | Not Available | Negative | 4455393 - 4456301 | 33659.2 |
| heme a synthase | DU508_19350 | Not Available | Negative | 4456313 - 4457371 | 39703.6 |
| cytochrome c oxidase subunit i | DU508_19355 | Not Available | Negative | 4457453 - 4459237 | 66681.5 |
| cytochrome c oxidase subunit ii | DU508_19360 | Not Available | Negative | 4459354 - 4460586 | 46155.2 |
| quinol:cytochrome c oxidoreductase | DU508_19365 | Not Available | Negative | 4460658 - 4461881 | 46211.9 |
| cytochrome c | DU508_19370 | Not Available | Negative | 4461897 - 4462520 | 22364.5 |
| duf3341 domain-containing protein | DU508_19375 | Not Available | Negative | 4462492 - 4463028 | 19825.2 |
| hydrogenase | DU508_19380 | Not Available | Negative | 4463031 - 4464503 | 55880.4 |
| 4fe-4s dicluster domain-containing protein | DU508_19385 | Not Available | Negative | 4464530 - 4467550 | 111009.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

