Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4302 domain-containing protein | DU508_19290 | Not Available | Negative | 4442189 - 4443541 | 49152.2 |
| hypothetical protein | DU508_19295 | Not Available | Negative | 4443546 - 4444928 | 51587.5 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_19300 | Not Available | Negative | 4444944 - 4446416 | 55146.1 |
| susc/raga family tonb-linked outer membrane protein | DU508_19305 | Not Available | Negative | 4446430 - 4449840 | 126445.0 |
| duf4974 domain-containing protein | DU508_19310 | Not Available | Negative | 4450406 - 4451578 | 44464.2 |
| rna polymerase sigma-70 factor | DU508_19315 | Not Available | Negative | 4451649 - 4452239 | 22634.6 |
| duf420 domain-containing protein | DU508_19320 | Not Available | Negative | 4452423 - 4452965 | 20456.9 |
| sco family protein | DU508_19325 | Not Available | Negative | 4453004 - 4453699 | 26287.0 |
| caa(3)-type oxidase | DU508_19330 | Not Available | Negative | 4453699 - 4454046 | 13107.6 |
| cytochrome oxidase subunit iii | DU508_19335 | Not Available | Negative | 4454072 - 4454779 | 26963.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

