Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase | DU508_19190 | Not Available | Negative | 4412742 - 4414463 | 61734.9 |
| long-chain fatty acid--coa ligase | DU508_19195 | Not Available | Negative | 4414435 - 4416210 | 66631.4 |
| hypothetical protein | DU508_19200 | Not Available | Positive | 4416478 - 4416942 | 16470.8 |
| m61 family peptidase | DU508_19205 | Not Available | Negative | 4417079 - 4418911 | 67904.1 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_19210 | Not Available | Positive | 4419331 - 4420440 | 38683.8 |
| acrb/acrd/acrf family protein | DU508_19215 | Not Available | Positive | 4420437 - 4423547 | 114204.0 |
| tolc family protein | DU508_19220 | Not Available | Positive | 4423549 - 4424859 | 48399.5 |
| n-acetylglucosamine kinase | DU508_19225 | Not Available | Positive | 4424918 - 4425739 | 30384.1 |
| response regulator | DU508_19230 | Not Available | Positive | 4425856 - 4426248 | 14699.9 |
| molecular chaperone htpg | DU508_19235 | Not Available | Positive | 4427541 - 4429421 | 70974.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

