Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | DU508_01830 | Not Available | Positive | 430615 - 431106 | 18145.1 |
| n-acetyltransferase | DU508_01835 | Not Available | Positive | 431493 - 431936 | 17096.4 |
| duf4142 domain-containing protein | DU508_01840 | Not Available | Positive | 431836 - 432597 | 28411.1 |
| peptidase s8 | DU508_01845 | Not Available | Positive | 432762 - 434375 | 58615.0 |
| nad(p)-dependent alcohol dehydrogenase | DU508_01850 | Not Available | Negative | 434543 - 435589 | 38121.0 |
| duf480 domain-containing protein | DU508_01855 | Not Available | Positive | 435763 - 436410 | 24067.6 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DU508_01860 | Not Available | Negative | 436423 - 437673 | 43993.4 |
| duf2798 domain-containing protein | DU508_01865 | Not Available | Negative | 437689 - 437898 | 7542.68 |
| sdr family nad(p)-dependent oxidoreductase | DU508_01870 | Not Available | Negative | 437912 - 438664 | 27206.8 |
| tetr/acrr family transcriptional regulator | DU508_01875 | Not Available | Negative | 438715 - 439302 | 21198.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

