Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dash family cryptochrome | DU508_19140 | Not Available | Negative | 4399964 - 4401238 | 48395.1 |
| tigr01777 family protein | DU508_19145 | Not Available | Positive | 4402080 - 4403006 | 34547.8 |
| deoxyribodipyrimidine photo-lyase | DU508_19150 | Not Available | Positive | 4403007 - 4404335 | 52332.7 |
| hypothetical protein | DU508_19155 | Not Available | Negative | 4404328 - 4405251 | 33092.2 |
| peptidylprolyl isomerase | DU508_19160 | Not Available | Negative | 4405252 - 4405737 | 17579.3 |
| acyl-coa dehydrogenase | DU508_19165 | Not Available | Negative | 4405929 - 4407722 | 65738.2 |
| four helix bundle protein | DU508_19170 | Not Available | Negative | 4407962 - 4408312 | 12989.9 |
| acetyl-coa c-acyltransferase | DU508_19175 | Not Available | Negative | 4408426 - 4409601 | 41663.4 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | DU508_19180 | Not Available | Negative | 4409696 - 4412104 | 89277.9 |
| marr family transcriptional regulator | DU508_19185 | Not Available | Negative | 4412114 - 4412548 | 16527.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

