Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | DU508_19090 | Not Available | Negative | 4385552 - 4387702 | 79751.9 |
| dna repair protein reco | DU508_19095 | Not Available | Positive | 4388026 - 4388751 | 28133.3 |
| Trna-val | Not Available | Not Available | Positive | 4388815 - 4388892 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 4388946 - 4389023 | Not Available |
| isoleucyl-trna synthetase | DU508_19110 | Not Available | Negative | 4389130 - 4389402 | 9907.4 |
| isoleucine--trna ligase | DU508_19115 | Not Available | Positive | 4389671 - 4393075 | 129868.0 |
| trar/dksa family transcriptional regulator | DU508_19120 | Not Available | Positive | 4393106 - 4393489 | 14302.9 |
| lipoprotein signal peptidase | DU508_19125 | Not Available | Positive | 4393489 - 4394091 | 22823.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | DU508_19130 | Not Available | Negative | 4395627 - 4396871 | 44142.3 |
| 2-oxoglutarate dehydrogenase e1 component | DU508_19135 | Not Available | Negative | 4396968 - 4399766 | 105330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

