Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DU508_19040 | Not Available | Negative | 4368081 - 4371203 | 113836.0 |
| transcriptional regulator | DU508_19045 | Not Available | Negative | 4371462 - 4374380 | 111719.0 |
| gdsl family lipase | DU508_19050 | Not Available | Negative | 4374986 - 4375645 | 25202.9 |
| hypothetical protein | DU508_19055 | Not Available | Negative | 4375763 - 4376128 | 13671.4 |
| tonb-dependent receptor | DU508_19060 | Not Available | Negative | 4376223 - 4378676 | 90799.2 |
| pspc domain-containing protein | DU508_19065 | Not Available | Negative | 4378835 - 4380451 | 61442.6 |
| padr family transcriptional regulator | DU508_19070 | Not Available | Negative | 4380467 - 4380802 | 12402.0 |
| amino acid permease | DU508_19075 | Not Available | Positive | 4381848 - 4383299 | 51893.8 |
| class i sam-dependent methyltransferase | DU508_19080 | Not Available | Negative | 4383826 - 4384452 | 24670.8 |
| hypothetical protein | DU508_19085 | Not Available | Negative | 4384533 - 4385441 | 35014.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

