Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | DU508_18990 | Not Available | Negative | 4352123 - 4353154 | 38540.2 |
| giy-yig nuclease family protein | DU508_18995 | Not Available | Positive | 4353780 - 4354082 | 12249.7 |
| d-glycerate dehydrogenase | DU508_19000 | Not Available | Negative | 4354803 - 4355762 | 35178.7 |
| duf4249 domain-containing protein | DU508_19005 | Not Available | Negative | 4355822 - 4356622 | 29762.0 |
| tonb-dependent receptor | DU508_19010 | Not Available | Negative | 4356627 - 4358951 | 87134.5 |
| hypothetical protein | DU508_19015 | Not Available | Negative | 4359023 - 4360177 | 43185.4 |
| glycosyl hydrolase family 5 | DU508_19020 | Not Available | Negative | 4360242 - 4361993 | 66733.5 |
| gluconolaconase | DU508_19025 | Not Available | Negative | 4362053 - 4365052 | 112181.0 |
| glucosylceramidase | DU508_19030 | Not Available | Negative | 4365068 - 4366465 | 51748.7 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_19035 | Not Available | Negative | 4366538 - 4368070 | 56216.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

