Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_18940 | Not Available | Positive | 4337472 - 4337885 | 16271.5 |
| tetratricopeptide repeat protein | DU508_18945 | Not Available | Positive | 4337947 - 4338552 | 22892.5 |
| beta-n-acetylglucosaminidase | DU508_18950 | Not Available | Negative | 4339524 - 4341341 | 67364.4 |
| amidohydrolase | DU508_18955 | Not Available | Negative | 4341328 - 4342962 | 60479.2 |
| dna mismatch repair endonuclease mutl | DU508_18960 | Not Available | Positive | 4343403 - 4345238 | 68424.7 |
| rhomboid family intramembrane serine protease | DU508_18965 | Not Available | Positive | 4345383 - 4346096 | 27283.5 |
| rhomboid family intramembrane serine protease | DU508_18970 | Not Available | Positive | 4346089 - 4346943 | 31704.5 |
| endonuclease | DU508_18975 | Not Available | Positive | 4346943 - 4348049 | 41847.0 |
| nad(p)h-dependent oxidoreductase | DU508_18980 | Not Available | Positive | 4348459 - 4349091 | 23067.8 |
| carboxypeptidase regulatory-like domain-containing protein | DU508_18985 | Not Available | Positive | 4349308 - 4351995 | 98816.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

