Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyltransferase | DU508_18880 | Not Available | Negative | 4330645 - 4331151 | 19241.6 |
| duf2807 domain-containing protein | DU508_18885 | Not Available | Positive | 4331279 - 4331983 | 24794.2 |
| hypothetical protein | DU508_18890 | Not Available | Negative | 4332119 - 4332532 | 15728.9 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DU508_18895 | Not Available | Negative | 4332605 - 4334017 | 53266.8 |
| phenylalanyl-trna synthetase subunit alpha | DU508_18900 | Not Available | Negative | 4334180 - 4334290 | 4300.15 |
| doxx family membrane protein | DU508_18905 | Not Available | Positive | 4334505 - 4334963 | 16852.2 |
| hypothetical protein | DU508_18920 | Not Available | Positive | 4335483 - 4335767 | 10854.5 |
| hypothetical protein | DU508_18925 | Not Available | Positive | 4335739 - 4336587 | 30684.9 |
| hypothetical protein | DU508_18930 | Not Available | Positive | 4336584 - 4336928 | 12094.2 |
| hypothetical protein | DU508_18935 | Not Available | Positive | 4336934 - 4337341 | 15470.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

