Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2384 domain-containing protein | DU508_18830 | Not Available | Negative | 4323511 - 4323981 | 17799.4 |
| gluconokinase | DU508_18835 | Not Available | Negative | 4324154 - 4324651 | 18485.2 |
| ferrochelatase | DU508_18840 | Not Available | Negative | 4324660 - 4325673 | 38619.5 |
| fatty acid desaturase | DU508_18845 | Not Available | Negative | 4325839 - 4326513 | 26755.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DU508_18850 | Not Available | Negative | 4326591 - 4327442 | 32133.9 |
| txe/yoeb family addiction module toxin | DU508_18855 | Not Available | Negative | 4327453 - 4327734 | 10826.1 |
| hypothetical protein | DU508_18860 | Not Available | Negative | 4327716 - 4327922 | 7949.72 |
| carotenoid biosynthesis protein | DU508_18865 | Not Available | Negative | 4327932 - 4328606 | 25473.2 |
| glycosyltransferase family 2 protein | DU508_18870 | Not Available | Negative | 4328576 - 4329673 | 41806.3 |
| glycerol acyltransferase | DU508_18875 | Not Available | Negative | 4329670 - 4330293 | 24377.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

