Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | DU508_18775 | Not Available | Negative | 4314142 - 4315680 | 56878.5 |
| hypothetical protein | DU508_18780 | Not Available | Negative | 4315789 - 4316319 | 19982.5 |
| iron-sulfur cluster assembly accessory protein | DU508_18785 | Not Available | Positive | 4316411 - 4316764 | 12790.1 |
| abc transporter permease | DU508_18790 | Not Available | Positive | 4316903 - 4318132 | 43812.2 |
| capsular biosynthesis protein | DU508_18795 | Not Available | Negative | 4318251 - 4318988 | 27905.6 |
| hypothetical protein | DU508_18800 | Not Available | Negative | 4319006 - 4319563 | 21610.3 |
| udp-glucose 4-epimerase gale | DU508_18805 | Not Available | Negative | 4319564 - 4320586 | 37344.2 |
| sdr family nad-dependent epimerase/dehydratase | DU508_18810 | Not Available | Negative | 4320588 - 4321577 | 37380.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | DU508_18820 | Not Available | Positive | 4321859 - 4323070 | 46170.1 |
| res domain-containing protein | DU508_18825 | Not Available | Negative | 4323060 - 4323509 | 16966.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

