Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-binding protein | DU508_18725 | Not Available | Negative | 4305774 - 4306133 | 13518.3 |
| hypothetical protein | DU508_18730 | Not Available | Negative | 4306155 - 4306622 | 17473.6 |
| fad-binding protein | DU508_18735 | Not Available | Negative | 4306656 - 4308203 | 56527.3 |
| hypothetical protein | DU508_18740 | Not Available | Negative | 4308673 - 4308876 | 7879.86 |
| lema family protein | DU508_18745 | Not Available | Positive | 4308881 - 4309462 | 21227.2 |
| tpm domain-containing protein | DU508_18750 | Not Available | Positive | 4309547 - 4309990 | 16112.1 |
| tpm domain-containing protein | DU508_18755 | Not Available | Positive | 4309994 - 4310782 | 27239.6 |
| hypothetical protein | DU508_18760 | Not Available | Positive | 4310924 - 4311310 | 14986.1 |
| nudix hydrolase | DU508_18765 | Not Available | Positive | 4311363 - 4311911 | 20743.9 |
| chromosomal replication initiator protein dnaa | DU508_18770 | Not Available | Negative | 4312068 - 4313498 | 53881.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

