Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_18675 | Not Available | Positive | 4294899 - 4295963 | 41225.7 |
| dna-binding response regulator | DU508_18680 | Not Available | Positive | 4295960 - 4296691 | 28298.2 |
| duf3861 family protein | DU508_18685 | Not Available | Negative | 4296787 - 4297089 | 11653.2 |
| methyltransferase | DU508_18690 | Not Available | Negative | 4297102 - 4297728 | 22935.5 |
| arac family transcriptional regulator | DU508_18695 | Not Available | Negative | 4297830 - 4298816 | 37452.2 |
| tonb-dependent receptor | DU508_18700 | Not Available | Positive | 4299028 - 4301418 | 90106.5 |
| duf4374 domain-containing protein | DU508_18705 | Not Available | Positive | 4301442 - 4302695 | 44761.5 |
| ankyrin repeat domain-containing protein | DU508_18710 | Not Available | Positive | 4302767 - 4304332 | 55665.5 |
| duf2271 domain-containing protein | DU508_18715 | Not Available | Positive | 4304338 - 4304814 | 17825.5 |
| hypothetical protein | DU508_18720 | Not Available | Negative | 4305143 - 4305409 | 10431.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

