Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_01775 | Not Available | Negative | 414912 - 416486 | 58867.6 |
| sterol desaturase family protein | DU508_01785 | Not Available | Negative | 420333 - 421556 | 48525.2 |
| rok family protein | DU508_01790 | Not Available | Positive | 421718 - 422476 | 28014.7 |
| nadp-dependent phosphogluconate dehydrogenase | DU508_01795 | Not Available | Positive | 422690 - 424105 | 52443.7 |
| glucose-6-phosphate dehydrogenase | DU508_01800 | Not Available | Positive | 424138 - 425652 | 57814.8 |
| 6-phosphogluconolactonase | DU508_01805 | Not Available | Positive | 425761 - 426486 | 27556.6 |
| hypothetical protein | DU508_01810 | Not Available | Positive | 426492 - 426857 | 13977.7 |
| exopolyphosphatase | DU508_01815 | Not Available | Negative | 426854 - 427735 | 33075.0 |
| polyphosphate kinase 1 | DU508_01820 | Not Available | Negative | 427735 - 429795 | 79604.0 |
| hypothetical protein | DU508_01825 | Not Available | Negative | 429894 - 430538 | 22793.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

