Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DU508_18565 | Not Available | Negative | 4276635 - 4277219 | 22895.6 |
| hydrolase | DU508_18570 | Not Available | Positive | 4277910 - 4278599 | 24957.1 |
| amidohydrolase | DU508_18575 | Not Available | Positive | 4278664 - 4280448 | 65877.3 |
| doxx family protein | DU508_18580 | Not Available | Positive | 4280513 - 4280953 | 16107.2 |
| hypothetical protein | DU508_18585 | Not Available | Positive | 4280950 - 4282323 | 52767.1 |
| ring-cleaving dioxygenase | DU508_18590 | Not Available | Positive | 4282661 - 4283596 | 35473.3 |
| alpha/beta hydrolase | DU508_18595 | Not Available | Positive | 4283608 - 4284234 | 23052.6 |
| hypothetical protein | DU508_18600 | Not Available | Positive | 4284234 - 4284590 | 13386.8 |
| crp/fnr family transcriptional regulator | DU508_18605 | Not Available | Negative | 4284650 - 4285228 | 22737.3 |
| hypothetical protein | DU508_18610 | Not Available | Positive | 4285599 - 4285841 | 9307.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

