Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoheptose isomerase | DU508_18515 | Not Available | Negative | 4262263 - 4262760 | 18959.1 |
| hypothetical protein | DU508_18520 | Not Available | Negative | 4262829 - 4263470 | 24351.2 |
| pdz domain-containing protein | DU508_18525 | Not Available | Negative | 4263642 - 4265348 | 62866.7 |
| ahpc/tsa family protein | DU508_18530 | Not Available | Negative | 4265404 - 4266537 | 41504.7 |
| duf4369 domain-containing protein | DU508_18535 | Not Available | Negative | 4266700 - 4267842 | 41712.9 |
| hypothetical protein | DU508_18540 | Not Available | Negative | 4267959 - 4269413 | 53971.0 |
| duf4843 domain-containing protein | DU508_18545 | Not Available | Negative | 4269388 - 4270197 | 30714.8 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_18550 | Not Available | Negative | 4270228 - 4271718 | 56675.6 |
| susc/raga family tonb-linked outer membrane protein | DU508_18555 | Not Available | Negative | 4271753 - 4275094 | 124972.0 |
| fecr family protein | DU508_18560 | Not Available | Negative | 4275371 - 4276489 | 41486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

