Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_18415 | Not Available | Positive | 4234133 - 4235323 | 44244.8 |
| alpha-l-fucosidase | DU508_18420 | Not Available | Positive | 4235412 - 4237259 | 69764.0 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | DU508_18425 | Not Available | Positive | 4237329 - 4238915 | 60793.7 |
| ldh family oxidoreductase | DU508_18430 | Not Available | Positive | 4238989 - 4240083 | 39323.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_18435 | Not Available | Negative | 4240191 - 4242101 | 70364.4 |
| susc/raga family tonb-linked outer membrane protein | DU508_18440 | Not Available | Negative | 4242120 - 4245233 | 112826.0 |
| rok family protein | DU508_18445 | Not Available | Negative | 4245320 - 4246510 | 43185.7 |
| signal peptidase i | DU508_18450 | Not Available | Negative | 4246651 - 4247844 | 45851.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DU508_18455 | Not Available | Negative | 4248026 - 4248760 | 27099.2 |
| hypothetical protein | DU508_18460 | Not Available | Negative | 4248771 - 4249496 | 26911.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

