Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanophycinase | DU508_18360 | Not Available | Negative | 4217813 - 4218910 | 39373.6 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_18365 | Not Available | Negative | 4218961 - 4220352 | 50744.5 |
| duf4974 domain-containing protein | DU508_18375 | Not Available | Negative | 4223846 - 4225072 | 46215.3 |
| rna polymerase subunit sigma-24 | DU508_18380 | Not Available | Negative | 4225117 - 4225704 | 22661.4 |
| abc transporter atp-binding protein | DU508_18385 | Not Available | Negative | 4225741 - 4227513 | 66635.6 |
| trna pseudouridine(38-40) synthase trua | DU508_18390 | Not Available | Negative | 4227725 - 4228477 | 28607.4 |
| duf4293 family protein | DU508_18395 | Not Available | Positive | 4228695 - 4229162 | 17199.7 |
| atp-dependent helicase | DU508_18400 | Not Available | Positive | 4229542 - 4231425 | 69502.5 |
| hypothetical protein | DU508_18405 | Not Available | Positive | 4231548 - 4233071 | 55806.0 |
| hypothetical protein | DU508_18410 | Not Available | Positive | 4233108 - 4233587 | 18463.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

