Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimeric intracellular cation channel family protein | DU508_18260 | Not Available | Positive | 4195919 - 4196533 | 22581.3 |
| hypothetical protein | DU508_18265 | Not Available | Negative | 4197141 - 4199225 | 77783.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DU508_18270 | Not Available | Negative | 4199731 - 4200474 | 26358.8 |
| agmatine deiminase family protein | DU508_18275 | Not Available | Negative | 4200585 - 4201661 | 40477.6 |
| four helix bundle protein | DU508_18280 | Not Available | Negative | 4201911 - 4202264 | 13466.5 |
| acyltransferase | DU508_18285 | Not Available | Negative | 4202396 - 4203265 | 32857.9 |
| hypothetical protein | DU508_18290 | Not Available | Negative | 4203550 - 4203777 | 8534.21 |
| ribonucleoside-diphosphate reductase subunit alpha | DU508_18295 | Not Available | Negative | 4204016 - 4206400 | 89428.7 |
| ribonucleoside-diphosphate reductase | DU508_18300 | Not Available | Negative | 4206599 - 4207570 | 37291.4 |
| septal ring lytic transglycosylase rlpa family protein | DU508_18305 | Not Available | Negative | 4208022 - 4208402 | 14145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

