Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 family protein | DU508_18160 | Not Available | Positive | 4171857 - 4172441 | 21547.0 |
| gmc family oxidoreductase | DU508_18165 | Not Available | Positive | 4172465 - 4174168 | 64381.4 |
| gfo/idh/moca family oxidoreductase | DU508_18170 | Not Available | Positive | 4174247 - 4175404 | 42432.0 |
| sugar phosphate isomerase/epimerase | DU508_18175 | Not Available | Positive | 4175414 - 4176472 | 39727.6 |
| cytochrome c552 | DU508_18180 | Not Available | Positive | 4176483 - 4176863 | 13746.1 |
| gfo/idh/moca family oxidoreductase | DU508_18185 | Not Available | Positive | 4176895 - 4178352 | 54195.5 |
| duf1080 domain-containing protein | DU508_18190 | Not Available | Positive | 4178437 - 4179117 | 25284.9 |
| mfs transporter | DU508_18195 | Not Available | Positive | 4179263 - 4180504 | 45846.8 |
| hydroxypyruvate isomerase | DU508_18200 | Not Available | Positive | 4180507 - 4181391 | 32816.6 |
| sugar phosphate isomerase/epimerase | DU508_18205 | Not Available | Positive | 4181401 - 4182273 | 32177.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

