Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DU508_18110 | Not Available | Positive | 4157511 - 4159067 | 56953.9 |
| lamg domain-containing protein | DU508_18115 | Not Available | Positive | 4159086 - 4159973 | 32007.7 |
| duf3131 domain-containing protein | DU508_18120 | Not Available | Positive | 4160085 - 4161773 | 62325.7 |
| beta-glucosidase | DU508_18125 | Not Available | Positive | 4161788 - 4163149 | 51704.2 |
| metallophosphatase | DU508_18130 | Not Available | Positive | 4163150 - 4164133 | 37336.6 |
| 1,4-beta-xylanase | DU508_18135 | Not Available | Positive | 4164141 - 4165871 | 66114.5 |
| beta-glucosidase bglx | DU508_18140 | Not Available | Positive | 4165890 - 4168184 | 83395.2 |
| phospholipase | DU508_18145 | Not Available | Positive | 4168416 - 4169198 | 29720.1 |
| yebc/pmpr family dna-binding regulatory protein | DU508_18150 | Not Available | Negative | 4169584 - 4170312 | 27265.1 |
| nad-dependent epimerase/dehydratase family protein | DU508_18155 | Not Available | Negative | 4170418 - 4171362 | 35449.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

