Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | DU508_18060 | Not Available | Positive | 4141236 - 4142192 | 36600.1 |
| hypothetical protein | DU508_18065 | Not Available | Positive | 4142247 - 4142930 | 25350.0 |
| tetr/acrr family transcriptional regulator | DU508_18070 | Not Available | Negative | 4142943 - 4143518 | 22014.5 |
| hypothetical protein | DU508_18075 | Not Available | Negative | 4143518 - 4143925 | 14607.7 |
| phenylalanine--trna ligase subunit alpha | DU508_18080 | Not Available | Negative | 4143928 - 4144968 | 39462.2 |
| glycine c-acetyltransferase | DU508_18085 | Not Available | Negative | 4145116 - 4146303 | 43421.4 |
| carboxypeptidase-like regulatory domain-containing protein | DU508_18090 | Not Available | Positive | 4146555 - 4149002 | 93842.5 |
| rhodanese-related sulfurtransferase | DU508_18095 | Not Available | Positive | 4149832 - 4150779 | 35570.4 |
| transcriptional regulator | DU508_18100 | Not Available | Positive | 4151254 - 4154133 | 110388.0 |
| tonb-dependent receptor | DU508_18105 | Not Available | Positive | 4154466 - 4157486 | 110091.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

