Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DU508_17960 | Not Available | Positive | 4116512 - 4118242 | 63727.7 |
| thioredoxin-dependent thiol peroxidase | DU508_17965 | Not Available | Positive | 4118398 - 4118862 | 17123.3 |
| transketolase | DU508_17970 | Not Available | Positive | 4118920 - 4119765 | 30732.4 |
| transketolase family protein | DU508_17975 | Not Available | Positive | 4119947 - 4120906 | 34512.7 |
| rna polymerase subunit sigma | DU508_17980 | Not Available | Positive | 4121045 - 4121605 | 21994.3 |
| hypothetical protein | DU508_17985 | Not Available | Positive | 4121639 - 4122295 | 24645.6 |
| hypothetical protein | DU508_17990 | Not Available | Positive | 4122387 - 4122827 | 17240.9 |
| aspartate aminotransferase family protein | DU508_17995 | Not Available | Positive | 4122958 - 4124097 | 41622.8 |
| dna-binding response regulator | DU508_18000 | Not Available | Positive | 4124168 - 4124845 | 26113.3 |
| sensor histidine kinase | DU508_18005 | Not Available | Positive | 4124937 - 4126238 | 49777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

