Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m3 family oligoendopeptidase | DU508_17910 | Not Available | Positive | 4102122 - 4103828 | 66014.1 |
| hypothetical protein | DU508_17915 | Not Available | Positive | 4103955 - 4104152 | 7598.97 |
| tonb-dependent receptor | DU508_17920 | Not Available | Positive | 4104465 - 4106885 | 91237.4 |
| mfs transporter | DU508_17925 | Not Available | Negative | 4107440 - 4108657 | 45013.3 |
| amino acid permease | DU508_17930 | Not Available | Positive | 4108943 - 4110889 | 70855.6 |
| transposase | DU508_17935 | Not Available | Positive | 4111968 - 4112513 | 22141.7 |
| hypothetical protein | DU508_17940 | Not Available | Positive | 4112470 - 4112961 | 18660.3 |
| potassium transporter kup | DU508_17945 | Not Available | Negative | 4113135 - 4115111 | 73742.5 |
| t9ss c-terminal target domain-containing protein | DU508_17950 | Not Available | Positive | 4115344 - 4115823 | 17502.3 |
| faa hydrolase family protein | DU508_17955 | Not Available | Positive | 4115897 - 4116508 | 23066.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

