Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_17860 | Not Available | Negative | 4093509 - 4094306 | 29785.2 |
| nad kinase | DU508_17865 | Not Available | Negative | 4094309 - 4095190 | 32719.4 |
| cbs domain-containing protein | DU508_17870 | Not Available | Negative | 4095199 - 4095861 | 24759.3 |
| alpha/beta hydrolase | DU508_17875 | Not Available | Negative | 4095861 - 4096625 | 28955.3 |
| gatb/yqey domain-containing protein | DU508_17880 | Not Available | Negative | 4096807 - 4097253 | 16464.2 |
| sdr family nad(p)-dependent oxidoreductase | DU508_17885 | Not Available | Negative | 4097822 - 4098580 | 27737.6 |
| port family protein | DU508_17890 | Not Available | Negative | 4098675 - 4099472 | 30389.3 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DU508_17895 | Not Available | Negative | 4099469 - 4100203 | 27598.5 |
| yiha family ribosome biogenesis gtp-binding protein | DU508_17900 | Not Available | Positive | 4100464 - 4101087 | 23524.4 |
| 4-hydroxybenzoate octaprenyltransferase | DU508_17905 | Not Available | Positive | 4101208 - 4102065 | 32277.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

