Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | DU508_17805 | Not Available | Positive | 4077206 - 4078864 | 61621.8 |
| methylmalonyl-coa mutase | DU508_17810 | Not Available | Positive | 4079022 - 4082393 | 125800.0 |
| acyl-acp desaturase | DU508_17815 | Not Available | Negative | 4082478 - 4083458 | 37950.5 |
| cytochrome-c peroxidase | DU508_17825 | Not Available | Positive | 4084332 - 4085468 | 42893.4 |
| hypothetical protein | DU508_17830 | Not Available | Negative | 4085462 - 4085932 | 17268.8 |
| glutamate racemase | DU508_17835 | Not Available | Negative | 4086458 - 4087276 | 30886.9 |
| omph family outer membrane protein | DU508_17840 | Not Available | Negative | 4088695 - 4089273 | 20494.5 |
| omph family outer membrane protein | DU508_17845 | Not Available | Negative | 4089335 - 4089865 | 20574.7 |
| outer membrane protein assembly factor bama | DU508_17850 | Not Available | Negative | 4090052 - 4092595 | 95535.5 |
| isoprenyl transferase | DU508_17855 | Not Available | Negative | 4092749 - 4093489 | 28345.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

