Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | DU508_17755 | Not Available | Positive | 4064875 - 4065639 | 28021.3 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | DU508_17760 | Not Available | Positive | 4065706 - 4066251 | 20804.3 |
| aspartate carbamoyltransferase catalytic subunit | DU508_17765 | Not Available | Positive | 4066260 - 4067189 | 34255.9 |
| outer membrane protein assembly factor bamd | DU508_17770 | Not Available | Positive | 4067611 - 4070634 | 115719.0 |
| hypothetical protein | DU508_17775 | Not Available | Positive | 4070639 - 4072336 | 63298.0 |
| spor domain-containing protein | DU508_17780 | Not Available | Positive | 4072391 - 4073866 | 55454.1 |
| mota/tolq/exbb proton channel family protein | DU508_17785 | Not Available | Positive | 4073869 - 4074573 | 25611.1 |
| biopolymer transporter exbd | DU508_17790 | Not Available | Positive | 4074573 - 4074974 | 14900.5 |
| energy transducer tonb | DU508_17795 | Not Available | Positive | 4074974 - 4075807 | 29474.3 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DU508_17800 | Not Available | Positive | 4075892 - 4077136 | 45633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

