Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | DU508_17705 | Not Available | Positive | 4052836 - 4053666 | 31040.1 |
| sh3 domain-containing protein | DU508_17710 | Not Available | Positive | 4054064 - 4054801 | 27783.0 |
| hypothetical protein | DU508_17715 | Not Available | Positive | 4055276 - 4055485 | 7982.49 |
| 30s ribosomal protein s1 | DU508_17720 | Not Available | Positive | 4056338 - 4058272 | 71482.0 |
| beta-n-acetylhexosaminidase | DU508_17725 | Not Available | Positive | 4059253 - 4060926 | 64181.0 |
| arac family transcriptional regulator | DU508_17730 | Not Available | Negative | 4060931 - 4061857 | 35587.1 |
| aldehyde dehydrogenase | DU508_17735 | Not Available | Positive | 4062096 - 4063601 | 54898.3 |
| duf779 domain-containing protein | DU508_17740 | Not Available | Positive | 4063712 - 4064086 | 14206.8 |
| hypothetical protein | DU508_17745 | Not Available | Positive | 4064196 - 4064405 | 8030.22 |
| thiol-disulfide oxidoreductase dcc family protein | DU508_17750 | Not Available | Negative | 4064402 - 4064812 | 15795.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

