Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DU508_17655 | Not Available | Positive | 4042813 - 4043133 | 12029.6 |
| duf4783 domain-containing protein | DU508_17660 | Not Available | Negative | 4043323 - 4043721 | 15106.3 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DU508_17665 | Not Available | Positive | 4043899 - 4045419 | 55666.9 |
| hypothetical protein | DU508_17670 | Not Available | Positive | 4045419 - 4045946 | 20338.8 |
| tetratricopeptide repeat protein | DU508_17675 | Not Available | Negative | 4046334 - 4046954 | 23739.4 |
| endopeptidase la | DU508_17680 | Not Available | Positive | 4047264 - 4049735 | 92216.0 |
| lipid a deacylase lpxr family protein | DU508_17685 | Not Available | Positive | 4049818 - 4050765 | 35623.2 |
| duf3667 domain-containing protein | DU508_17690 | Not Available | Negative | 4050835 - 4051548 | 27400.1 |
| aminoacyl-trna hydrolase | DU508_17695 | Not Available | Negative | 4051610 - 4052020 | 15710.3 |
| (d)cmp kinase | DU508_17700 | Not Available | Positive | 4052095 - 4052775 | 25808.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

