Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_01675 | Not Available | Negative | 390171 - 390668 | 16935.3 |
| diphthine--ammonia ligase | DU508_01680 | Not Available | Negative | 390798 - 391523 | 27510.1 |
| nad-dependent deacylase | DU508_01685 | Not Available | Negative | 391513 - 392202 | 25528.7 |
| hypothetical protein | DU508_01690 | Not Available | Negative | 392290 - 392880 | 22323.7 |
| tonb-dependent receptor | DU508_01695 | Not Available | Negative | 393008 - 394891 | 68754.8 |
| hypothetical protein | DU508_01700 | Not Available | Positive | 395262 - 396506 | 48376.6 |
| polyphosphate kinase 2 family protein | DU508_01705 | Not Available | Negative | 396678 - 397556 | 33853.6 |
| penicillin-binding protein | DU508_01710 | Not Available | Positive | 397702 - 400155 | 93793.1 |
| tolb protein precursor | DU508_01715 | Not Available | Positive | 400319 - 403492 | 119398.0 |
| hypothetical protein | DU508_01720 | Not Available | Negative | 404045 - 404248 | 7590.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

