Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | DU508_17605 | Not Available | Negative | 4032059 - 4032571 | 19769.8 |
| duf4294 domain-containing protein | DU508_17610 | Not Available | Negative | 4032578 - 4033192 | 23628.8 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DU508_17615 | Not Available | Positive | 4033303 - 4035510 | 83696.2 |
| transcriptional repressor | DU508_17620 | Not Available | Positive | 4036100 - 4036597 | 19283.1 |
| adenylosuccinate synthase | DU508_17625 | Not Available | Positive | 4036636 - 4037916 | 46731.2 |
| aminodeoxychorismate synthase component i | DU508_17630 | Not Available | Positive | 4038270 - 4039490 | 46352.2 |
| m48 family peptidase | DU508_17635 | Not Available | Negative | 4039749 - 4040555 | 29154.0 |
| glycerol-3-phosphate 1-o-acyltransferase | DU508_17640 | Not Available | Negative | 4040650 - 4041297 | 23167.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | DU508_17645 | Not Available | Negative | 4041348 - 4042211 | 31357.3 |
| type ii toxin-antitoxin system rele/pare family toxin | DU508_17650 | Not Available | Positive | 4042469 - 4042816 | 13997.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

