Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_17355 | Not Available | Positive | 3989362 - 3989790 | 15808.9 |
| nitrogen regulatory iia protein | DU508_17360 | Not Available | Positive | 3989809 - 3990093 | 11210.6 |
| conjugative transposon protein tram | DU508_17365 | Not Available | Positive | 3990080 - 3991417 | 48958.8 |
| conjugative transposon protein tran | DU508_17370 | Not Available | Positive | 3991442 - 3992335 | 34194.1 |
| conjugal transfer protein trao | DU508_17375 | Not Available | Positive | 3992358 - 3992918 | 20921.3 |
| duf3872 domain-containing protein | DU508_17380 | Not Available | Positive | 3992930 - 3993376 | 17275.3 |
| iclr family transcriptional regulator | DU508_17385 | Not Available | Negative | 3993438 - 3994130 | 26263.8 |
| sdr family nad(p)-dependent oxidoreductase | DU508_17390 | Not Available | Positive | 3994233 - 3995000 | 28288.2 |
| heme-binding protein | DU508_17395 | Not Available | Positive | 3995020 - 3995469 | 15650.8 |
| molybdenum abc transporter permease | DU508_17400 | Not Available | Positive | 3995536 - 3995811 | 10752.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

