Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | DU508_17305 | Not Available | Positive | 3980084 - 3980356 | 10928.1 |
| conjugal transfer protein trad | DU508_17310 | Not Available | Positive | 3980360 - 3980995 | 23628.7 |
| hypothetical protein | DU508_17315 | Not Available | Positive | 3981027 - 3982379 | 52144.1 |
| hypothetical protein | DU508_17320 | Not Available | Positive | 3982398 - 3983699 | 50461.6 |
| duf4134 domain-containing protein | DU508_17325 | Not Available | Positive | 3983900 - 3984205 | 10555.9 |
| duf4133 domain-containing protein | DU508_17330 | Not Available | Positive | 3984217 - 3984546 | 12326.6 |
| trag family conjugative transposon atpase | DU508_17335 | Not Available | Positive | 3984543 - 3987047 | 95790.2 |
| duf4141 domain-containing protein | DU508_17340 | Not Available | Positive | 3987075 - 3987707 | 23912.9 |
| conjugative transposon protein traj | DU508_17345 | Not Available | Positive | 3987711 - 3988706 | 36617.9 |
| conjugative transposon protein trak | DU508_17350 | Not Available | Positive | 3988728 - 3989351 | 24246.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

