Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_17255 | Not Available | Negative | 3970335 - 3970895 | 20862.6 |
| universal stress protein | DU508_17260 | Not Available | Positive | 3971059 - 3971856 | 28866.9 |
| sensor histidine kinase | DU508_17265 | Not Available | Negative | 3971875 - 3973248 | 51863.9 |
| dna-binding response regulator | DU508_17270 | Not Available | Negative | 3973248 - 3973928 | 25964.5 |
| conjugal transfer protein trag | DU508_17275 | Not Available | Negative | 3974000 - 3976000 | 76184.0 |
| relaxase | DU508_17280 | Not Available | Negative | 3976102 - 3977388 | 48484.4 |
| hypothetical protein | DU508_17285 | Not Available | Negative | 3977397 - 3977828 | 16684.4 |
| para family protein | DU508_17290 | Not Available | Positive | 3978587 - 3979354 | 29068.4 |
| duf3408 domain-containing protein | DU508_17295 | Not Available | Positive | 3979360 - 3979788 | 16680.9 |
| duf3408 domain-containing protein | DU508_17300 | Not Available | Positive | 3979800 - 3980072 | 10704.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

