Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetracycline regulation of excision, rtec | DU508_17205 | Not Available | Negative | 3957211 - 3958035 | 32448.9 |
| port family protein | DU508_17210 | Not Available | Negative | 3958129 - 3958782 | 24086.0 |
| port family protein | DU508_17215 | Not Available | Negative | 3958806 - 3959552 | 28105.4 |
| tolc family protein | DU508_17220 | Not Available | Negative | 3959564 - 3960901 | 50349.2 |
| acrb/acrd/acrf family protein | DU508_17225 | Not Available | Negative | 3960865 - 3963963 | 114676.0 |
| efflux rnd transporter periplasmic adaptor subunit | DU508_17230 | Not Available | Negative | 3964003 - 3965148 | 42253.6 |
| magnesium-translocating p-type atpase | DU508_17235 | Not Available | Negative | 3965348 - 3968053 | 100503.0 |
| hypothetical protein | DU508_17240 | Not Available | Negative | 3968065 - 3968622 | 20725.4 |
| mgtc/sapb family protein | DU508_17245 | Not Available | Negative | 3968628 - 3969338 | 25336.2 |
| t9ss c-terminal target domain-containing protein | DU508_17250 | Not Available | Negative | 3969761 - 3970399 | 24050.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

