Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_17155 | Not Available | Negative | 3942758 - 3942985 | 8544.28 |
| dna-binding protein | DU508_17160 | Not Available | Positive | 3943000 - 3943353 | 13791.5 |
| dna-binding protein | DU508_17165 | Not Available | Positive | 3943365 - 3943673 | 12145.7 |
| duf3945 domain-containing protein | DU508_17170 | Not Available | Positive | 3943759 - 3945219 | 55721.7 |
| type ia dna topoisomerase | DU508_17175 | Not Available | Positive | 3945226 - 3947319 | 77808.8 |
| orf6n domain-containing protein | DU508_17180 | Not Available | Positive | 3947309 - 3948190 | 33865.0 |
| hypothetical protein | DU508_17185 | Not Available | Positive | 3948902 - 3948967 | 2549.11 |
| duf262 domain-containing protein | DU508_17190 | Not Available | Negative | 3949025 - 3951160 | 85249.4 |
| duf1896 domain-containing protein | DU508_17195 | Not Available | Positive | 3951339 - 3951776 | 16796.7 |
| dna methylase | DU508_17200 | Not Available | Positive | 3951763 - 3957201 | 205896.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

